Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848890.1_cds_XP_016510581.1_23404
CDS Infomation

[gene=LOC107827877] [db_xref=GeneID:107827877] [protein=26S protease regulatory subunit 6B homolog] [protein_id=XP_016510581.1] [location=complement(join(4779..4913,5080..5163,5364..5516,5608..5766,6694..6924,8998..9477))] [gbkey=CDS]
Sequence

ATGGCAACACCCATGGTTCTCGATCCAAAACCCTTACCAGAGCCACCATCAACCCGACCC
GACCCATCTGTTCACGACGTTCCCTCCGACGGCGAAGACGACCTCTATGCCCGCCTAAAA
TCTCTTCAACGGCAGCTGGAGTTCATCGAGATACAAGAGGAATACGTCAAGGACGAACTG
AAAAATCTCCGGCGAGAACACTTACGTGCACAGGAAGAAGTCAAACGGATTCAATCGGTG
CCGCTAGTAATCGGTCAGTTCATGGAGATGATTGATACGAATAACGCTATTGTAGGGTCC
ACTACGGGATCTAATTACTACGTTAGAATACTCAGCACGATTAATCGGGAGCTACTTAAA
CCCTCGGCTTCTGTGGCTTTGCATCGTCACTCGAATGCGCTTGTTGATGTTTTGCCTCCT
GAGGCTGATTCGAGTATTTCTCTGCTTAGCCAATCGGAGAAGCCTGATGTTACCTATAGT
GATATTGGAGGATGTGACATACAAAAGCAGGAAATCCGTGAGGCTGTTGAGTTACCTCTG
ACTCATCACGAGTTGTACAAGCAGATTGGTATAGATCCTCCCCGTGGTGTCTTGCTTTAT
GGTCCACCAGGTACCGGGAAAACTATGCTTGCAAAGGCTGTCGCTCATCACACTACTGCT
GCCTTCATAAGGGTTGTTGGCTCAGAATTTGTTCAGAAGTACTTGGGTGAGGGTCCTCGA
ATGGTTCGTGATGTCTTTCGCCTTGCCAAAGAAAATGCTCCTGCAATCATATTTATTGAT
GAGGTAGATGCAATTGCAACTGCCAGGTTTGATGCTCAGACTGGAGCTGATAGGGAGGTC
CAGCGTATCCTCATGGAGTTGCTAAATCAGATGGATGGATTTGACCAGACCGTGAATGTG
AAAGTTATTATGGCAACTAATAGAGCTGATACTTTGGATCCTGCACTTTTGCGCCCTGGA
AGGCTTGATCGGAAGATTGAATTTCCTTTGCCTGATAGGCGTCAAAAGAGGCTTGTTTTT
CAGGTCTGCACTGCTAAGATGAACTTAGGTGATGAGGTCGACTTGGAAGATTATGTTTCT
CGCCCTGATAAAATTAGTGCTGCTGAGATTTCAGCTATTTGTCAGGAAGCAGGTATGCAT
GCAGTGCGAAAGAATCGATATGTCATTCTCCCCAAGGACTTCGAAAAGGGCTACAGGACC
AATGTGAAGAAGCCTGACACTGACTTTGAATTCTACAAGTGA

Peptide Sequence

PEP ID

XP_016510581.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tabacum]
Sequence

MATPMVLDPKPLPEPPSTRPDPSVHDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVKDEL
KNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDTNNAIVGSTTGSNYYVRILSTINRELLK
PSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYSDIGGCDIQKQEIREAVELPL
THHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPR
MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS
RPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK

Transcript Sequence

Gene sequence data has not been registered.